Publications

Pre-prints and coming soon…

Jacobs A., Carruthers M., Yurchenko A., Gordeeva N.V., Alekseyev S.S., Hooker O., Leong J.S., Rondeau E.B., Koop B.F., Adams C.E., Elmer K.R. (2019) Convergence in form and function overcomes non-parallel evolutionary histories in a Holarctic fish. [PDF] bioRxiv preprint; in revision.

Salmón P.*, Jacobs A.*, Ahrén D, Biard C., Dingemanse N.J., Dominoni D., Helm B., Lundberg M., Senar JC, Sprau P., Visser M.E. & Isaksson C. – Repeated genomic signatures of adaptation to urbanization in a songbird across Europe. in review,(*shared first authors).

Burgon J., Vieites D., Jacobs A., Weidt S., Gunter H., Steinfartz S., Burgess K., Mable B. & Elmer K.R. – Functional colour genes are under selection in colour polymorphic salamanders. in review.

Watson H., Powell D., Salmón P., Jacobs A. & Isaksson C. – Urbanisation is associated with modifications in DNA methylation in a small passerine bird. submitted.

2019                      

Jacobs A. & Therkildsen N.O. (2019) Excavating ghost footprints and tangled trees from modern genomes. [PDF]. Molecular Ecology 28(14), 3287-3290. (News & Views article)

Jacobs A.*, Carruthers M.*, Eckmann R., Yohannes E., Adams C.E, Behrmann-Godel J.† & Elmer K.R.† (2019) Rapid niche expansion by selection on functional genomic variation after ecosystem recovery. [PDF]. Nature Ecology and Evolution 3, 77–86. (*shared first authors, †corresponding authors)

2018                      

Jacobs A., Hughes M.R., Robinson P.C., Adams C.E., Elmer K.R. (2018). The genetic architecture underlying the evolution of a rare piscivorous life history form in brown trout after secondary contact and strong introgression. [PDF]. Genes 9(280).

Jacobs A., Doran C., Murray D., Duffill Telsnig J., Laskowski K.L., Jones N.A.R., Auer S.K., Praebel K. (2018). On the challenges and opportunities facing fish biology: a discussion of five key knowledge gaps. [PDF]. Journal of Fish Biology 92, 690–698

Jacobs A., De Noia M., Praebel K., Kanstad-Hanssen Ø., Paterno M., Jackson D., McGinnity P., Sturm, A., Elmer K.R., Llewellyn M.S.  (2018). Genetic fingerprinting of salmon louse (Lepeophtheirus salmonis) populations in the North-East Atlantic using a random forest classification approach. [PDF]. Scientific Reports  8, 1203.

2017                      

Jacobs A., Womack R., Chen M., Gharbi K. & Elmer K.R.  (2017). Significant synteny and co-localisation of ecologically relevant quantitative trait loci within and across species of salmonid fishes. [PDF]. Genetics 

2015                      

Recknagel H., Jacobs A., Herzyk P., & Elmer K. R.  (2015). Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms. [PDF]. Molecular ecology resources 15(6), 1316-1329.